Collaborative messaging applications such as Slack (or it's open source counterpart Mattermost) are popular communication tools for organizations, and the logs of the converstions on these forums often contain very valuable question and answer sets. Unfortunately, these Q&A sets can be difficult to identify and search since they are usually embedded in non-topical conversations. To help solve this problem for a company I consulted with I developed a search tool '/qlog' that operates as a mattermost slash bot that performs a natural language search for question and answer sets within the messaging conversation logs.

older .abf files require the downgraded 0.4.x version of python-neo to read

A very simple model that can explan the production of fruit fly flight saccades by way of differential recruitment of flight muscles

Overview of the procedures I used to make a multicolor image from a confocal stack of phalloidin stained muscle tissue

Crossing Cyo and Cyo, WeeP

I wanted to manualy annotate annotate time series data to ground truth a behavioral classifier. I was able to construct a simple GUI to do this in the jupyter notebook by bridging python and jupyter using Bokeh

Installing neuron so that the program is exposed to the system python requires building from source.

Install of Kinefly: ubuntu v16.01, ros Kinetic, PointGrey blackfly usb3 cameras. Setup notes for install, almost in script form. Requires download of point-grey drivers from the point-grey website

Approach used to extract intermingled signals from an image stream using a prior model of the spatial distribution of sources.

Setting an instance on the google compute engine to serve my website. Part 2: deploying the site to the google compute engine